Plugins extend the AutoPipe Results Viewer with custom file viewers.
This page is a catalog for browsing available plugins — to install, update, or uninstall them, open the AutoPipe desktop app and click the Plugins button.
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All Plugins (13)
pdf-viewer
PDF document viewer with zoom, page navigation, and fullscreen support
text-viewer
Syntax-highlighted text viewer with line numbers, word wrap toggle, and search
image-viewer
Image viewer with zoom, pan, rotate, and metadata display
hdf5-viewer
HDF5/h5ad tree explorer with server-side h5py extraction. Small datasets show full values; large datasets show a preview slice.
gff-viewer
Interactive GFF/GTF annotation viewer with feature type coloring, attribute parsing, and region statistics
fastq-viewer
FASTQ read viewer with per-base quality score heatmap, Q-score distribution, and read length statistics
fasta-viewer
Sequence viewer with colored nucleotides, sequence statistics, and GC content calculation
csv-viewer
Delimited data viewer with auto-delimiter detection, column sorting, filtering, and summary statistics
cram-viewer
CRAM alignment summary viewer with container metadata, reference information, and file structure display
bed-viewer
Interactive BED file viewer with column detection, color-coded fields, sorting, filtering, and region statistics
bcf-viewer
Binary VCF viewer with server-side pagination via bcftools (Docker-based)
bam-viewer
BAM alignment viewer with server-side pagination, FLAG decoding, CIGAR visualization, and MAPQ filtering