Plugins extend the AutoPipe Results Viewer with custom file viewers. Install plugins in the app to preview additional file formats.
Plugin Creation Guide →Search Plugins
All Plugins (13)
PDF document viewer with zoom, page navigation, and fullscreen support
.pdf
Syntax-highlighted text viewer with line numbers, word wrap toggle, and search
.txt.log.json.yaml.yml.xml.md.sh.py.r.R.nf.smk.cfg.ini.toml
Image viewer with zoom, pan, rotate, and metadata display
.png.jpg.jpeg.gif.svg.webp.bmp.tiff.tif
HDF5 tree explorer with collapsible group hierarchy, dataset preview, and attribute display
.h5ad.h5.hdf5
Interactive GFF/GTF annotation viewer with feature type coloring, attribute parsing, and region statistics
.gff.gtf.gff3
FASTQ read viewer with per-base quality score heatmap, Q-score distribution, and read length statistics
.fastq.fq
Sequence viewer with colored nucleotides, sequence statistics, and GC content calculation
.fasta.fa
Delimited data viewer with auto-delimiter detection, column sorting, filtering, and summary statistics
.csv.tsv.tab
CRAM alignment summary viewer with container metadata, reference information, and file structure display
.cram
Interactive BED file viewer with column detection, color-coded fields, sorting, filtering, and region statistics
.bed
Binary VCF viewer with variant type classification, header metadata, and genotype field parsing
.bcf
BAM alignment viewer with IGV.js integration, BGZF decompression, FLAG decoding, CIGAR visualization, and MAPQ filtering
.bam